Scientists at the Wellcome Trust Sanger Institute, where one-third of the human genome was sequenced, have now pioneered decoding the sequence of cancer genomes. They have carried out the broadest survey yet of the human genome in cancer by sequencing more than 250 million letters of DNA code, covering more than 500 genes and 200 cancers.
The survey, published in Nature, shows that the number of mutated genes that drive development of cancer is greater than previously thought. Significantly, as well as driver mutations for cancer, each cell type carries many more passenger mutations that have hitchhiked along for the ride. The study shows that a challenge for cancer biologists will be to distinguish the drivers from the larger number of passengers.
“The human genome is a vast place and this, our first deep systematic exploration in cancer, has thrown up many surprises”, said Professor Mike Stratton, co-leader of the Cancer Genome Project at the Sanger Institute. “We have found a much larger number of mutated driver genes produced by a wider range of forces than we expected.”
All cancers are believed to be due to mutations ? abnormalities in genes. The availability of the human genome sequence has opened the door to analysing hundreds to thousands of genes, which will ultimately allow us to acquire a complete catalogue of the mutations in individual cancers.
The team studied more than 500 genes of a type called kinases, some of which have been previously implicated in causing cancers. One example is the BRAF gene: the 2002 pilot phase of the team?s work showed that BRAF was mutated in more than 60% of cases of malignant melanoma. That observation has driven discovery of new drugs to treat melanoma, some of which are in clinical trials. The current study was much broader and included breast, lung, colorectal and stomach cancers, which are the most common cancer types.
The new research showed that mutations in cancers can be divided into drivers or passengers. Driver mutations are the ones that cause cancer cells to grow, whereas passengers are co-travellers that make no contribution to cancer development. The team identified possible driver mutations in 120 genes, most of which had not been seen before.
“It turns out that most mutations in cancers are passengers,” explained Dr Andy Futreal, co-leader of the Cancer Genome Project. “However, buried amongst them are much larger numbers of driver mutations than was previously anticipated. This suggests that many more genes contribute to cancer development than was thought.”
- « Cancer :: Researchers analyze new kinds of cancer-fighting antibodies
- Cancer :: New drugs for cancer therapy at international conference in Amsterdam »
Sub-editorCancer :: Large gene mutations involved in developing cancer
by Sub-editor ( Author at Spirit India )
Posted on March 8th, 2007 at 9:37 pm.
Find more from SpiritIndia on: Cancer